rs51607801 SNP Detail

Summary

• ID
  rs51607801
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:65141353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATCTTTCT AAAGGATGCC
  AGTGTGAAGG GTGGGGCCCT TTATCCCTTA GGTAAATCAA TGTGGTACAT GGCAGAGATT
  CCTTGCTACT TGTCAAATTT CCATAAAAAG CTGTCTCTTT GGGTTGAGGA TGCCCTGGCC
  CAGCTTACCC CAGCCCTGGG TTCTCCCTCA GACAGGGCCA TCTGAACATA ACATATAAGG
  S
  TGTAGGCCAG ATCAGTTTCT GCGCTCTTCC ACTAGCCAAT CGCAGGTCAA TCAAGACTGT
  ACTTCTGGCA GAAGCTGTGT TGACTCATCC AGGCTAAAAA TAACTCTTGA CCTTGTGTGA
  TTTGGTTCAT ATTCTTCTCC AGAGTCTGAC ATCCATCTTC TCCGACTGTT AACTCCTACT
  TGATTGCATT TAGTTCACAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60622513	NES16302466	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	C	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51607801					SNP	G	G	G	G	G	G	G	C	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60622513	NES16302466	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:65141353 () rs orientation: forward

Symbol	Name	Function Class
Cpe	carboxypeptidase E	within coordinates
Rr664168	regulatory region 664168	within coordinates
Rr664169	regulatory region 664169	464 bp proximal
Tssr81419	transcription start site region 81419	1158 bp downstream