rs51609437 SNP Detail

Summary

• ID
  rs51609437
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16404862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAGCTAA ATTAACTCTA
  CAATATAGTG GATTAAAATT ACTAGAATCA GAAATGAAAT TGGAGATACT GTTACACATG
  CTTCAGAATT ACAAGAATTC CATGGTTAAT AAAATGTATT CTGTGTGTGT ATGTATCATA
  GATTTAAGAG TACAATGTCA AGACCAAAAA AATAGTGTCT GCAGATGGCA TGAACTTGTT
  Y
  GTAAAGAATG CTAAACATGT TTTCAGGACT GATGGTCAAA CTCGGCACCG CCACTGCCAC
  CCCACCTCCA CCCCCAGCAA ATGAGCGGAC TCTAATGAGT TGGGTTTTTC TGTGCTGATA
  GTAACCATAA ACAAAACAAT TGGTTTTGTT CCATGTATAG GGAAAGAGGC AGAATGTTAG
  TTGCTGTTGT GAATGGAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss148392613	ENSMUSSNP5299522	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs51609437					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16404862 () rs orientation: forward

Symbol	Name	Function Class
Ceacam15	CEA cell adhesion molecule 15	394 bp downstream
Rr642728	regulatory region 642728	1951 bp distal