rs51610733 SNP Detail

Summary

• ID
  rs51610733
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16454771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGACCCCT TCTGGGTACA
  GTGACTCTTT CCTGTTGCTT AATGAATTTT TCTCTTGTGT GACCTGAGTG CAAGGCCAGG
  ACTCCCAAGC TCACCTCCAG TGTGTCTAAT CTAGATGGGT GCACAAGGGA GGGGCTCAGG
  AACTGGGGTT CCTTTGTGGG AGCAGGTAAC TAGACAGGGC CTTCCCGGTG CTTAAGAAGG
  Y
  GAATAGTAGC CAAGAAAGCC AAATCCATCT GGAGAGATGG CTCAGTGGTT AAGAGAAACG
  ACTGCTCTAC CAGAGGTCCT GAGTTCAATT CCCAGCAACC ACAGGGTGGC TCACAGCTAT
  CTGTCATGGG ATCTGATGCC CTCTTCTGGT GTGGCTGAAG ACAGCAACAG TGTACTCATA
  TGAATAAAAG AAATAAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60972103	NES16154402	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	T	T	C	C	C	T	T	T	C
ss148394848	ENSMUSSNP3761859	ENSEMBL	ENSEMBL_Sanger	f	SNP		C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51610733					SNP	T	C	C	C	T	T	C	C	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60972103	NES16154402	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16454771 () rs orientation: forward

Symbol	Name	Function Class
Ceacam9	CEA cell adhesion molecule 9	1083 bp upstream
Gm5586	predicted gene 5586	936 bp upstream
Tssr64618	transcription start site region 64618	1108 bp upstream
Tssr70767	transcription start site region 70767	906 bp upstream