rs51612309 SNP Detail

Summary

• ID
  rs51612309
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:41768250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTGGGTA AGAGCACCCG
  ACTGCTCTTC TGAAAGTCTG AAGTTCAAAT CCCAGCAACC ACATGGTGGC TCACAACCAT
  CTGTAACAAG ATCTGACTCC CTCTTCTGGA GTGTCTGAAG ACAGCTACAG TGTACTTACA
  TATAATAAAT AAATCTTTAA AAAAAAACAA ACAAACAAAA AAAAAGAAGT TAGGCTAAAG
  R
  GGTCATTGTT TTAGATTAAT AGTTGTTACA TTTGTTTCAA AAGGAACATT TTTCTCTCCT
  GGAACTTAAT ATACAATGTT CAAACTTAGA CACATACATG GACAAGCTAG TTAAGTGTCT
  CTTCTAATGA ATATAATGTT ACACACTATC TTCAGTATGA GTGTGGAATA ACCACAGTAA
  GAAGTAACCA ATGTCCAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147075440	ENSMUSSNP6835588	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51612309					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:41768250 () rs orientation: forward

Symbol	Name	Function Class
Sesn1	sestrin 1	within coordinates
Tssr93071	transcription start site region 93071	1693 bp upstream
Tssr93072	transcription start site region 93072	1713 bp upstream