rs51612461 SNP Detail

Summary

• ID
  rs51612461
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52142730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGT GGCACTACCT TGTGCTGGTG
  R
  TCCTAGGTTC TGTAAGAGAG CAGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss135176181	ENSMUSSNP2353084	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320764104	CHEV_3_52039231	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs51612461					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52142730 () rs orientation: forward

Symbol	Name	Function Class
Gm38132	predicted gene, 38132	within coordinates
Or14m1-ps1	olfactory receptor family 14 subfamily M member 1, pseudogene 1	1529 bp downstream
Rr374955	regulatory region 374955	1015 bp downstream
Rr576473	regulatory region 576473	1364 bp proximal