rs51613759 SNP Detail

Summary

• ID
  rs51613759
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30842201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCAG AAGCTCCCGT CCAGGTCACT
  W
  AGGGAGGCTG GGGGCATGGA CACTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss148700758	ENSMUSSNP2127739	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322139673	CHEV_7_31927795	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51613759					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30842201 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18838	CpG island 18838	within coordinates
Gramd1a	GRAM domain containing 1A	within coordinates
Tssr71945	transcription start site region 71945	144 bp upstream