rs51613949 SNP Detail

Summary

• ID
  rs51613949
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:71962533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATACCCTTC CCTAGCTATA TAAAACTGAA
  TTATTGTATA TTCTTTAGTC TTTCCCTACA GGTTCCATAT TAATTCATTC AGATGTATAC
  ATTTGCTGTG TCTTGGTTTG GGTTCAGCGT TTTGTAACTA TCCCATGCCT GCTTAGACAG
  R
  ACCATAGACC CGTCACCCTT GAATTCTTGA GTGGAATGCT TATTGTACTT AACAGGCTAA
  CTACGTTTCA AATCTTCTAC ATGGCACTGA CTTTTTCCCT ACCATGCACA AATTACAGCT
  AGATGTGCAA CAGTAAAATC TTTTGCCATA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss144647965	ENSMUSSNP760071	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss319787556	CHEV_1_71969948	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51613949					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:71962533 () rs orientation: forward

Symbol	Name	Function Class
Gm70455	predicted gene, 70455	1200 bp downstream