rs51614296 SNP Detail

Summary

• ID
  rs51614296
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102336298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTAAGTTT CTTTATGCGA
  TTTTGTTCTC CAGAGTGAAC TTTGTAGACT ACAATATCAA AAGGTTGCAC CTAGCAACCA
  GTGCCTCCAC GGTCCTCAGG GCCGCGAAGG GAGGGGGAAG AGCCTGGAAG CGGCAGAAAC
  CAGCCTCGGG TCTGGAAGCA GTGGCGGTCC GTGCCTTCCT GACCTTCGGG CACTAGGCAG
  T
  TCCCCAGGGC GGTGGGATTG GGAACAGGGG AGGGTAAAGA GGGCAGGACC TGTGTTGTCC
  TCCAAAGAGG TCTGCTGTCG CCTCCTTCTC TAAGCAGCTG TGGAGGCGCG GGGCTCCAGC
  GGTCCAATCC GCAGCGTAGG AAGCAGCGGG GCGCTCGCCC GCCGCCGGAA GCCGCGATAG
  CAGCGGGGGC GAGGGACCCA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145571429	ENSMUSSNP1529319	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51614296					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102336298 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	within coordinates
Gm45527	predicted gene 45527	872 bp upstream
Rr652623	regulatory region 652623	within coordinates
Rr652624	regulatory region 652624	169 bp proximal
Trim68	tripartite motif-containing 68	within coordinates
Tssr73953	transcription start site region 73953	161 bp downstream