rs51614775 SNP Detail

Summary

• ID
  rs51614775
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28685579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGCAGCGCCT GGGGAGACAG AGAACGTGGG CGCCATGCCG
  GGGGTCAGGG GACCCTGAGG TCAAGCGCGA TCGCGGGGGG CACCCGGGCG ACAAGCTCAC
  C
  TGAGAGATGC CAGACTCGAA CTCGTCCGGC TTCTCGCCAT TGGGCTTCAC GATCTTGGCG
  CTCGAGCTGA ACATGGCTTC ACCCTGAGGG GAGGAAGGTG C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137502231	ENSMUSSNP1795573	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51614775					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28685579 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4510	CpG island 4510	within coordinates
Gm53713	predicted gene, 53713	489 bp upstream
Rps7	ribosomal protein S7	within coordinates
Rr255850	regulatory region 255850	1822 bp proximal
Rr265285	regulatory region 265285	within coordinates
Rr369505	regulatory region 369505	217 bp upstream
Tssr116014	transcription start site region 116014	340 bp upstream
Tssr116015	transcription start site region 116015	252 bp downstream
Tssr116016	transcription start site region 116016	263 bp downstream
Tssr116017	transcription start site region 116017	287 bp downstream
Tssr116018	transcription start site region 116018	311 bp downstream
Tssr116019	transcription start site region 116019	334 bp downstream