rs51624480 SNP Detail

Summary

• ID
  rs51624480
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:80818132 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATGATAG CCTGACCCTA
  CCCTCACCAC ACCCAGTTAC CACAACCACA AGGCATTTAC CAGCTTGTGT CAACAAAGAA
  TATCTAGAAC TTGAAAATGT GTCTTTCTCA GGAGAAGGCC TAACATCCTC TAGTTCCCTC
  GGGGGCTGAT CTGATAAGGA CACAAAAATC TTAACACTGA GGAGTTTTGA TGTCAGCTCG
  W
  GGTAGGCCTG ACCTGCCTCT CACTCCTCAG CCCAAGGGTA TCTTACCCAG AGACCAAGAA
  AGTGCATGCA TATAATTCAA GGCTAGCCTA CACTTCATCC TGACATAAAA TGCTAAGTAG
  GTAGGCTGTC GATGGTAGTT AGGAGATGCC TCTGGACATG ATATGAAACT TCCTGAATGC
  TAGACATTAG TCTCCATGAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135386102	ENSMUSSNP4953295	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51624480					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:80818132 () rs orientation: forward

Symbol	Name	Function Class
Glrb	glycine receptor, beta subunit	within coordinates
Gm54207	predicted gene, 54207	1713 bp upstream
Rr578673	regulatory region 578673	1982 bp proximal