rs51626127 SNP Detail

Summary

• ID
  rs51626127
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:90407241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATATATATA TATATATATA TATATATATA TATATATATA
  TATATATATC ATTCTTTCTT GCTATGCTTC AAGTCATAGC AACGATAAAA AGTCAAAAGT
  R
  GTCTCTTTAG AAGGCTTAGT TTGTATGTGT CCTTAGAAAC CAATAAAGGA ACACTTTTAA
  TGCTAATAAA TCCAGAGAGA ACATGATACC TGGTAAAGTG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss62969026	NES17419707	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs51626127					SNP	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62969026	NES17419707	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:90407241 () rs orientation: forward

Symbol	Name	Function Class
Nrxn1	neurexin I	within coordinates
Rr336618	regulatory region 336618	560 bp proximal