rs51627440 SNP Detail

Summary

• ID
  rs51627440
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:16805261 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTCTGCAACC CTATAGGTGG AACAACAATA TGAACTAACC
  AGTACCCCCC ACCCCCCGGA GCTCATTTCT CTAGCTGCAT ATGTATCAGA AGATGGCCTA
  T
  CTGGCCATCA GTGGAAAGAG AGGCCCATTA GTTGTGCAAA CTTTATATGC CTAAGTACAG
  GGAAATGCCA GGGCCAAGAA GTGGGAGTGG TTGGGTAGGG G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147018437	ENSMUSSNP2762469	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs51627440					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:16805261 () rs orientation: forward

Symbol	Name	Function Class
Rr370925	regulatory region 370925	1587 bp upstream