rs51633881 SNP Detail

Summary

• ID
  rs51633881
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18091949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT CATTACATAC TCTAGAGATA
  Y
  ATATTTCTGA CACAGACTAT TGGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145227504	ENSMUSSNP1572609	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325312336	CHEV_17_18008651	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51633881					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18091949 () rs orientation: forward

Symbol	Name	Function Class
Gm36907	predicted gene, 36907	1166 bp downstream
Rr340653	regulatory region 340653	within coordinates
Tssr5021	transcription start site region 5021	537 bp downstream
Tssr5022	transcription start site region 5022	514 bp downstream
Tssr5023	transcription start site region 5023	7 bp downstream
Tssr142818	transcription start site region 142818	276 bp upstream