rs51634337 SNP Detail

Summary

• ID
  rs51634337
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18996427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCACCACTT TTTCCAGGCC
  TGCACCACCA ATGGCATTTC TCCACGCACA CAGACTGGGG AAGCTCTCCC ACTAACACTA
  ACGAGGCCTT GTGAAGTCAA CATCTCAGCC ACTGGGCTGT TTTCCCTACA GAAAGCAGAG
  CAGTCACCTA GGACACCGCG AGGTGGGTGG GGACATGGCT CAGTGGTAGA GCACCTGAGT
  R
  GCTTGTCCAA AGCCACCCCC CCATTCAACC ACCAGCACCT CTTAAAAAAA AAAAAAAAAA
  AAAGGCAGGA TTTTGGCATC ATTAGGGAAT TTAAAATAAA AGAAGATTTG TTCCCTGCAC
  TAGAGTTTCC ACTTGACCCA GATCACCACA TGGGCTGAAT GTTTCCAAAA ACAGTAAGAA
  ATACCATGTA GCTGGGCATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148471657	ENSMUSSNP2889645	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss322116771	CHEV_7_19847851	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51634337					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18996427 () rs orientation: forward

Symbol	Name	Function Class
Tssr70879	transcription start site region 70879	1800 bp upstream
Tssr70880	transcription start site region 70880	1559 bp upstream
Tssr70881	transcription start site region 70881	1495 bp upstream
Tssr70882	transcription start site region 70882	443 bp upstream
Tssr70883	transcription start site region 70883	1967 bp downstream
Vasp	vasodilator-stimulated phosphoprotein	within coordinates