rs51636329 SNP Detail

Summary

• ID
  rs51636329
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72077973 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTGGGGGG CTACGGGTAC
  TCATGGCGGT ATACACCTTT AATCCCAGCA CTTGGGAGGC TGAAGAAGGA GAATTGTGTG
  TTTGAAGTCA ACCTGAGATA CATTGCAAGC TTAAGGCTCG TGTATGCTAC ATTCTAAGTC
  CCTGTAGTCT TGTTTTATAT TCTGTGTCAG GACATTTTTC TATCTCAAAC TTCTCTTCAA
  Y
  AAGATTTTTA AGACTGATGC TCTGTGTAAC GTTTCCCTGT GTCTTGTTTT TTTTTTTTTT
  TTTTTTTTTG ACATGTTCAT ATTCCTTGAA ATATTTTGAG TAGTATTTCT GGAAATTGAA
  TTTTTTTATT CTTTAATTAT TTTAGTATAC AATATAATGG CATTTTATCC TGACATTTTC
  ATATACAGCA ATGCATCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss61419994	NES16807023	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51636329					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61419994	NES16807023	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72077973 () rs orientation: forward

Symbol	Name	Function Class
Gm69817	predicted gene, 69817	751 bp downstream
Rr383574	regulatory region 383574	236 bp downstream