rs51636427 SNP Detail

Summary

• ID
  rs51636427
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:128845367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGTAGAGA ATAATAGTGA
  GCACCATAGA TTCTTAAGAA TGATTTAAAG ACGTATAAAA AAGAGGAGTA AGAGATTTCC
  GCATTTCTGC TAGATAGCAG GAAGTGTATT CCCTGTCTGA TAGACATAGA TTTCCCTGAG
  CCTAACCTAA ACGTGACATA GGCTTTCTCT GTTAAACAGC GTGCGAAGGG TTTGCGGTAG
  R
  GGCAAGGCTC ACTACAAAAT GATTCCCCCA GAGATGTTAT AAAATACATT CTAAAAACAT
  AGAGCATGGA GGAGCAGAGT CAGGAGCCGC AGGCCATGCA ATCCTCCTTA CAAGTGGAAC
  TTAGTATCTA CACTATGAGG CAGCTTTCTT TCAAAATAAT ATTTCCATTT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss149245185	ENSMUSSNP5881443	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321688095	CHEV_5_129274178	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51636427					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:128845367 () rs orientation: forward

Symbol	Name	Function Class
Gm42875	predicted gene 42875	1730 bp upstream
Rimbp2	RIMS binding protein 2	within coordinates