rs51641185 SNP Detail

Summary

• ID
  rs51641185
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55166109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CTCGCATCCC AGTCCCCTCT TCACCCCTAG TTTTCCATTC
  ACGTTATCCT GTTGCTTCTG AAATGTGTCA GAGCCTCCAG ACCCTTCCCA TCACCACGCC
  M
  AAAAGGCCTT TCCCGTTAGC ATTGCCTTTC CACCCTCTCC AGTCTCTCAC CCCCACAGCA
  GCTCTGTGCT CCTCCTATGT CGGAGCATGG TCTCATTCTC T                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss139573244	ENSMUSSNP2171026	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51641185					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55166109 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6479	CpG island 6479	1584 bp distal
Gm62292	predicted gene, 62292	1892 bp upstream
Rr389680	regulatory region 389680	409 bp upstream
Rr492368	regulatory region 492368	1402 bp distal
Rr492369	regulatory region 492369	1868 bp proximal
Tssr128674	transcription start site region 128674	1882 bp upstream
Tssr128675	transcription start site region 128675	1847 bp upstream
Tssr128676	transcription start site region 128676	1624 bp upstream