rs51644257 SNP Detail

Summary

• ID
  rs51644257
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3673149 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTTGC TGGAGTGTAG TTTGTCTAGG
  Y
  GTGTACCAAG AATCTGAAGA TAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146748569	ENSMUSSNP2251952	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss323242455	CHEV_10_6623392	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51644257					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3673149 () rs orientation: reverse

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	1549 bp distal
Rr227319	regulatory region 227319	within coordinates