rs51645519 SNP Detail

Summary

• ID
  rs51645519
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144077053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCT GGGATTAAAG GCATGTGCCA
  Y
  CAACTGCCCA GTAACATTTT CTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147788220	ENSMUSSNP4623626	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss320535395	CHEV_2_144060869	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51645519					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144077053 () rs orientation: forward

Symbol	Name	Function Class
Gm75267	predicted gene, 75267	within coordinates
Gm75270	predicted gene, 75270	1763 bp upstream
Rr397360	regulatory region 397360	1283 bp downstream
Rr566413	regulatory region 566413	1269 bp distal