rs51645694 SNP Detail

Summary

• ID
  rs51645694
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:94886606 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTACAGA GAATGAGAAC
  ACAACATCAT AGAAACCTCC CTCTTCACCA AACATTGTAC ACGGAGAGTA CTGAGGGACC
  GTGGTTAAAG TCTCCTTTAA TGAGGCTGTA AAATGTGGAT CAGAAAATCA GCGTGGAACA
  GAGAACTCCC TTTGCATACA GCTGGCTGTC ACCTTCAGAG GGACTGAGAG AGCTCAGAGC
  R
  GCATCAAGCG GTTCCAGATC GTCTCTAAGA TCCGAGGGTA GAACCGAGCA TGCTGTGTCT
  TGAGTCCAGA ATGGGTGCTC TGGAGGCTGG TTTCCCACTC CGTATCCGCT TGTTCTGCAC
  ATTCTATAGG AGATGAGAGA GACTCAAGAT ACTGAGTGTT TGCCCCTCCT GTGTTTCTTC
  CTGCTGACCC CATAAAGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63596423	NES17037867	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51645694					SNP	A	A	A	A	G	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63596423	NES17037867	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:94886606 () rs orientation: forward

Symbol	Name	Function Class
Gm23129	predicted gene, 23129	1587 bp upstream
Gm52203	predicted gene, 52203	within coordinates
Rr391133	regulatory region 391133	1754 bp downstream
Tmem117	transmembrane protein 117	within coordinates