rs51645886 SNP Detail

Summary

• ID
  rs51645886
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84706510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCCCAGAT ATAGTTAAGG TGCCAACTAA GATTAACCAT
  TAGAGAGAAT GGCTGGCATT TCTGTGCCAT AAACCTGGTG TCAGACCACT GCTCCAGCTC
  Y
  TCTGCCAGGG TGGAGTTAGG ATTCTCTCTC CACCAGCACC CTACAAAGTC ATCATGGTTT
  TGTCCCCATT TGCTCCCGTA GAAAACTGAG ACCCAGAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145368172	ENSMUSSNP272471	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss322746879	CHEV_8_86503780	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51645886					SNP	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84706510 () rs orientation: forward

Symbol	Name	Function Class
Prkaca	protein kinase, cAMP dependent, catalytic, alpha	within coordinates
Rr666366	regulatory region 666366	1758 bp distal
Tssr78320	transcription start site region 78320	1420 bp downstream
Tssr78321	transcription start site region 78321	631 bp upstream