rs51650679 SNP Detail

Summary

• ID
  rs51650679
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169343631 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGAAATG TCTGGTGGGC
  TGTTTCTAAT GAAATCAAAT TCCCAGTTGT TTCCCATTAG GTCATTTTGT CATTTATTCA
  GCTTTGCTAA ATCCATACCT TTGTTTTGAT GTACACCCCC CTGCCCCAAC ACATACACAC
  TCTTTAGAAT GTAGGCAAAC AGAACTGAGT GGCTGTAGTC CACCCAGTAA GCCCTACATC
  R
  TCTTCATGGT AGTCACAGAC ATGCGTCCCC TTAGACACAT CCATCAGTGA ATTCAGCATT
  TTCCAAGGAA CAAAAGAAAG GGTCGGCCCA TTTGCACATG GAGAATACTC CCTCGATGTG
  CTAAGAGTTC CTAATGAGGA CAGCAGCCAT CTGGCAAACA ACCCACTAGA TTGAAACAAC
  AACAAAGTCA ACATAAGCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148286660	ENSMUSSNP3896448	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51650679					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169343631 () rs orientation: forward

Symbol	Name	Function Class
Gm14249	predicted gene 14249	within coordinates
Rr571204	regulatory region 571204	within coordinates
Rr571205	regulatory region 571205	1034 bp proximal