rs51652368 SNP Detail

Summary

• ID
  rs51652368
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:84344305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAACTTC CAAAAGGAAA
  AGCTGGCCTT TAGATGGTTT CCTTAATGAA TTCCACTCAT TTTTCAATTT TTTAAAATTA
  CATATATGTG TATGTGTTTG TGTGGGTGCT TGCATGTGCT CATTCATGAC TGCTATGGCT
  CGCATGGGGA GACCAGAGGA CAACTTTTGA GAGTTGATTC TTTTCTCCTT CCATCATGTG
  K
  GTTCTGGGGA TTGAATTCAG ACTTGGAGAC AAGTGTTTTT TCCTGCTGAA CCATCAAAAT
  GACCTTATTT ATGTATCTTT TTTTATACCA GAACAATACT GTTTTGATTA CCACAGTCCA
  ATTTAGAATA GATCTAAATT TCTTTTTAGT TGTATTTCTT TACTGGTAAA AGCCAGGTAC
  ATGTTTTCCC CAATTTTTGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss137927383	ENSMUSSNP1958809	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51652368					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:84344305 () rs orientation: forward

Symbol	Name	Function Class
Ptgr2	prostaglandin reductase 2	within coordinates
Rr469618	regulatory region 469618	1819 bp proximal
Tssr114334	transcription start site region 114334	1309 bp downstream