rs51653808 SNP Detail

Summary

• ID
  rs51653808
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33150762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGTAGTTG AGCAGACTCC
  TCATTGATCT TGACATCGTT GAGAGAGACA AGGCAGACGA CTTCTCCTGG TGTTTCTGCT
  GGTCCTGGTC ACTCCTGCTG ACTCATGCTG GTTCTGTGGA AGCCTGGATG TTTGTTATGG
  GTCGTGACAC AATTGCTGAT TCATGTTTGG TATCCTGACC CTACCCAAAC AGGACTGCTG
  K
  CATCCTGAGG ATTGGAGACT AAACTCACCC CAAGGAACTA CTTCTAAACA GCATACAGCA
  GAGCCCCAAG GCTTCTTCTG GATCAACCTG CCATTGCTGC TTCATGAATG GTGTTTGGAG
  TGGATTGAGC TGCTGCTGCT GAGTGTGACC TGAGCTGCTG ATATCCTGAC AATGCAGATT
  GTTAAATCTA TCTATCTATC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137582052	ENSMUSSNP6030349	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51653808					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33150762 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	1950 bp upstream
Rr464869	regulatory region 464869	1460 bp proximal
Rr464870	regulatory region 464870	1961 bp proximal