rs51653912 SNP Detail

Summary

• ID
  rs51653912
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110812437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTC ACCTGCCATT CCAGTCTGGG
  C
  ACCCAGTGCA AACTGGCTAG CTAGC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136961036	ENSMUSSNP1291126	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss323195250	CHEV_9_110885873	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51653912					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110812437 () rs orientation: forward

Symbol	Name	Function Class
Lrrc2	leucine rich repeat containing 2	within coordinates
Rr198767	regulatory region 198767	764 bp proximal
Rr207418	regulatory region 207418	237 bp distal
Rr211513	regulatory region 211513	1835 bp proximal
Rtp3	receptor transporter protein 3	1566 bp downstream