rs51655208 SNP Detail

Summary

• ID
  rs51655208
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:45569335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAC CCTGGCCCTG GCAGGCCTTC
  T
  CCTGCCCTCA GCCATATGCT CACCA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss149150476	ENSMUSSNP1428891	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs51655208					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45569335 () rs orientation: forward

Symbol	Name	Function Class
Emp3	epithelial membrane protein 3	Intron
Gm72819	predicted gene, 72819	1372 bp downstream
Rr400324	regulatory region 400324	1279 bp upstream
Rr646607	regulatory region 646607	1923 bp distal
Rr646608	regulatory region 646608	436 bp distal
Rr646609	regulatory region 646609	930 bp proximal
Tssr66660	transcription start site region 66660	1858 bp downstream
Tssr72489	transcription start site region 72489	552 bp upstream
Tssr72490	transcription start site region 72490	245 bp downstream
Tssr72491	transcription start site region 72491	477 bp downstream
Tssr72492	transcription start site region 72492	716 bp downstream
Tssr72493	transcription start site region 72493	740 bp downstream
Tssr72494	transcription start site region 72494	764 bp downstream
Tssr72495	transcription start site region 72495	770 bp downstream
Tssr72496	transcription start site region 72496	789 bp downstream
Tssr72497	transcription start site region 72497	919 bp downstream
Tssr72498	transcription start site region 72498	1200 bp downstream
Tssr72499	transcription start site region 72499	1350 bp downstream
Tssr72500	transcription start site region 72500	1507 bp downstream