rs51658066 SNP Detail

Summary

• ID
  rs51658066
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71043380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTAAAAGG CTGGAAAAAG GTAAAAAAGA AAATGATGAC
  AGTTTCCTAG GATTATTTGT TGTCAGTATG GTTTTAGAAG AAGTCACAGT TTTTACACAA
  W
  AATTCCAACA GAGGAAACAT ACGAATTTAG ATCAGATTTT ACTAAATGAA ACTACTATGA
  TAATGCTTTT CGCTCAAGGA TAAGGGCATA AAGTATGAC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss132382660	ENSMUSSNP1867560	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323739600	CHEV_11_70966056	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51658066					SNP	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71043380 () rs orientation: forward

Symbol	Name	Function Class
Nlrp1b	NLR family, pyrin domain containing 1B	548 bp downstream