rs51661333 SNP Detail

Summary

• ID
  rs51661333
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:84565200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGATGGTGG GCAGGCTCGA
  GAACCTGACT CCAGGTCAAG ATGGCTCGGC TTGCGAAGGT GCTTGCCGCA AAGCCTGGAG
  ACCTGAATTA GGTTCCTGGG ACTCATATGG TAGCACAGAA CTGACTCCAA GTTGTCCTCT
  GAACTCCCAT GTGTGCTATG GTATGTGCTC CTACATACAC ACACACACAC GGACACACAC
  M
  CCCCACATAA TGTTAGGAAA CTGATGAAGA GGAGGAGGAG GTGGAGGAAG AAGAATCCAG
  TTCACAGGTG TTTGCAGCAA GCCTGGCTAA GCTGAGGCCT TGTCCTCTGA AGACCTGTAT
  CTGGTGGCCG TGCTGAATCA ATGTTGAGGA TACAGTATCT TAGTCAGCCC TGCTATTTTC
  TTTCTTCAGG GTTTATATTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135427421	ENSMUSSNP2941275	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51661333					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84565200 () rs orientation: forward

Symbol	Name	Function Class
Gm37240	predicted gene, 37240	within coordinates
Rr68541	regulatory region 68541	1800 bp distal
Rr68542	regulatory region 68542	201 bp proximal
Rr68543	regulatory region 68543	1001 bp proximal
Rr76452	regulatory region 76452	1092 bp proximal