rs51661792 SNP Detail

Summary

• ID
  rs51661792
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84850085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAAACTTAA CTTTTAATAA GGGTTTTCAA GCATTTTGAC
  TCCCCTGCCC CCAACACACA CACTTCTAGC CCACCATCCA AAGGTAGGGC AGAAAAGATG
  K
  TAAGTAGGGC AAGGGGATGT GGACCTGTTT AGAAGTAGTT CTTTGGTGTG ATTCCAATCT
  CCATTTGCCA GGATACCAGC AGCCCAGTTC AGTAGTGCC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146139077	ENSMUSSNP5057952	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51661792					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84850085 () rs orientation: forward

Symbol	Name	Function Class
4930500A05Rik	RIKEN cDNA 4930500A05 gene	within coordinates
Plekhh2	pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	within coordinates
Tssr149687	transcription start site region 149687	590 bp downstream
Tssr149688	transcription start site region 149688	605 bp downstream