rs51670535 SNP Detail

Summary

• ID
  rs51670535
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101315806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGCC AGGACTACAT CAGGGCTTAG
  Y
  TTGCCACTGA TGCTAGTGAT GGCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145557477	ENSMUSSNP3223474	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss322351574	CHEV_7_108815113	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51670535					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101315806 () rs orientation: forward

Symbol	Name	Function Class
Clpb	ClpB caseinolytic peptidase B	within coordinates
Rr381220	regulatory region 381220	230 bp upstream
Rr652446	regulatory region 652446	within coordinates
Rr652447	regulatory region 652447	162 bp proximal