rs51681257 SNP Detail

Summary

• ID
  rs51681257
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185868043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTGACAT GTAGAAAAGC
  CTTAGGCTGT GGAGCAAGGA TCAGTAGCTG ACTTTTATAA GGGCATGGAG AAGACAGGGG
  TTGGTCCTTT GGAGTAGTGG CCTCTGGTGA GCGGATTCTG TAAGCAATGG CTGTGCTCCA
  GTTGAACACT TTCAAGAGAT GATAATTGGT AAAGACCATT TAATCACACC TTGCCTTTCT
  W
  TCAGCTACAG CTGTGGATGA GTAGGAGACA CCCTGCTGAG GACACCACCT TTGATTGCTT
  AAAAAAAAAA AAAAAAAGCT TAAAGCTTTT GAAGGCATTT TTTCTTCTTC TTAGTAAGTG
  AAAAATCAGG GTCTTTTTCT GTTTTTATCC AGAACATACA CGAAAGGGTA CAAATGGACC
  TGATGAAATT TTTTAATTAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146452381	ENSMUSSNP5036920	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss320182225	CHEV_1_187959725	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51681257					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185868043 () rs orientation: forward

Symbol	Name	Function Class
Rr425453	regulatory region 425453	907 bp proximal
Rr425454	regulatory region 425454	1998 bp proximal