rs51684307 SNP Detail

Summary

• ID
  rs51684307
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78980201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAATTTGC CTAATTCCTG
  CAAGCTATTA ATGTAGCCTT ATGTGGAAGG AGGTCTATGT GGACAGGTGT TAGAATCTTG
  GTTATCCAGA TGGGCTCTGA TCCAGTGACG GGGATCTTGC AAGACGCACA GACATTGGAG
  TTCCCCAGCT GAGAGCTACA GAGGCTTTCT CTCCTGGAGA GCTGACCTCC ATCTTGATTT
  C
  AGGGTTTTGG CTTTCTGAAT AATGTGACTT CTGCTCTACA AGGGAACTGA CTAGGCACCG
  CTAGGCAAGG AGGAGGTCCA TGTATGGAGA AACCAGATCC TACCTGTGGA GCTTAAACTT
  TGACAGGGTG ATAAATTATG CTTGCCAGGA CGATGATAAA ATCTATGGGG AATTACAATG
  CCACAAGGAT AGTTTTGACC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148192442	ENSMUSSNP918769	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51684307					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78980201 () rs orientation: forward

Symbol	Name	Function Class
Eif3l	eukaryotic translation initiation factor 3, subunit L	1601 bp downstream
Gm25072	predicted gene, 25072	944 bp upstream
Rr505521	regulatory region 505521	619 bp proximal
Rr505522	regulatory region 505522	1159 bp proximal