rs51686933 SNP Detail

Summary

• ID
  rs51686933
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156192677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGATC CCTCCCCTGG GAGCTGCAAT
  T
  CGAGGAGGCT TCCTCTCAGA GCTGT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148126425	ENSMUSSNP357050	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs51686933					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156192677 () rs orientation: forward

Symbol	Name	Function Class
9430015G10Rik	RIKEN cDNA 9430015G10 gene	1778 bp upstream
Cpgi15500	CpG island 15500	1409 bp proximal
Gm69135	predicted gene, 69135	within coordinates
Rr398931	regulatory region 398931	1520 bp upstream
Tssr40790	transcription start site region 40790	1751 bp upstream
Tssr40791	transcription start site region 40791	1793 bp upstream