rs51688355 SNP Detail

Summary

• ID
  rs51688355
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34877275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCATGTC AACAATTAAA
  GCAAGAATTC CTTTTCTGAA GGAGCCACAC CACACTACAG GAACCTCAAA GAATTCAGCA
  AAGGGATCAA CGCCTGCACT GTCAGAGAAG ACTATATGAT GAAAAAAAGT AAGATGAAGA
  AACCTGTTTG AAAAGGCCCA GAGAAAAATG TGCTACTGTC AAAAGCAGCC TGAGTGATGC
  R
  CAGTGGGTGG TGCACTGCAG GTGGTACTCT GCAGGTGATA CATTGCAGGT GGTGCACTGC
  AGGTGGCACT CTGCAGGTGA TACATTGCAG GTGGTGCTCT GCAGGTGATA CTCCACAGAC
  AGCTTTCTAC TCCCTGTGCT TTGCCAACTC TACCATGAGC AAAAACCCAA TGCCAACAGA
  CCAAGAACTA GGCCAAACTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147562950	ENSMUSSNP206145	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51688355					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34877275 () rs orientation: forward

Symbol	Name	Function Class
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	901 bp upstream
Tssr133983	transcription start site region 133983	788 bp upstream
Tssr133984	transcription start site region 133984	1693 bp downstream