rs51690561 SNP Detail

Summary

• ID
  rs51690561
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:65140687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTCCTTG AGCATTGCTC
  TTGCGGACAC GATAACACAA ATAGTCACAC ACATGATAAT CATTTAAAAA ATAAAAGTAT
  GAAACCATGA AGCAGCCGAA TAAGGAAAGA CGAATTGTGG TGGCCCAGTC TCACTAACTT
  TCCTCATCAA AACACTCCCC TGTTTCGTGG TCTCGGAATC ACACTCATGT TTAGTAAGCG
  Y
  ATGTAATAAG TAAGAAGTGG CTACATAAGT CACTGTGCTA GTCACTTATG AACGTCAATC
  ACACAAAAGG TAAAGGCGTG CACCCCCTCC TGAGGAGCAT CCCTTATGAG GCACTTTGTT
  GGAGAATTAC AAAATAAATC CTGACTGGTG AAATAATGAA TGCCTATACT GTATTGTATG
  CACCCAACAG GGCTGGGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60622517	NES16302488	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51690561					SNP	C	C	C	C	C	T	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60622517	NES16302488	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:65140687 () rs orientation: forward

Symbol	Name	Function Class
Cpe	carboxypeptidase E	within coordinates
Rr664168	regulatory region 664168	471 bp proximal
Rr664169	regulatory region 664169	1130 bp proximal
Tssr81419	transcription start site region 81419	1824 bp downstream