rs51694048 SNP Detail

Summary

• ID
  rs51694048
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:13278736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCATACTA AAAACACTGT
  GGCCATTTAT TATGACACTG TAACTTTTCC AATCTCTCTT TCTCTAAGAA AGGGCCCTCT
  CTACCAGGTA TAACTGTCAA GAGTGTCTCT GAGCATCATA AATCTTCTTT CTGTTTTTAA
  GTGTTGCTGT CCCCTGTCCT CTTGCCTCTC CCCCCCCCCC CCCACTACTT TCTTAGGCTT
  Y
  TATACCATAT CTCACATTGC AGAGCACTGT GAGAAGCAAC CATGAATACT CACTTATGGA
  GTTCAGTCAA ACCATTACAT CTTCCCAGAC TTACTTTGGT TATTTCAAAG GAAAGAAACA
  CTGAACAAAA CAAGCTTTGC CACATGACTA TCCATCCCTT CCTCCATTTG CTGACACCGC
  CTGGCCCTCC CAAGATAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss63397574	NES16968138	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51694048					SNP	C	C	C	C	C	C	T	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63397574	NES16968138	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:13278736 () rs orientation: forward

Symbol	Name	Function Class
D15Mit53	DNA segment, Chr 15, Massachusetts Institute of Technology 53	1805 bp proximal
Rr306252	regulatory region 306252	1736 bp distal