rs51697846 SNP Detail

Summary

• ID
  rs51697846
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55206994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCT CTGCTCAAGC TGTGTGTTGG
  Y
  TTCCCATCTC TTCTGACTGC ATCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52723008	NES15567954	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C		T	C	C	C		C
ss139574366	ENSMUSSNP2621514	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C
ss324641237	CHEV_14_55588374	CHEVERUD	SCREENING_POP	f	SNP											C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs51697846					SNP	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723008	NES15567954	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55206994 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	1147 bp downstream
Rr407057	regulatory region 407057	1754 bp distal
Rr492380	regulatory region 492380	732 bp distal
Rr492381	regulatory region 492381	124 bp proximal
Tssr125718	transcription start site region 125718	854 bp downstream
Tssr125719	transcription start site region 125719	762 bp downstream
Tssr125720	transcription start site region 125720	737 bp downstream
Tssr125721	transcription start site region 125721	725 bp downstream
Tssr125722	transcription start site region 125722	277 bp downstream
Tssr125723	transcription start site region 125723	235 bp downstream
Tssr125724	transcription start site region 125724	195 bp downstream
Tssr125725	transcription start site region 125725	630 bp upstream
Tssr125726	transcription start site region 125726	655 bp upstream
Tssr125727	transcription start site region 125727	688 bp upstream
Tssr125728	transcription start site region 125728	1496 bp upstream
Tssr128746	transcription start site region 128746	1562 bp upstream
Tssr128747	transcription start site region 128747	1538 bp upstream
Tssr128748	transcription start site region 128748	1494 bp upstream
Tssr128749	transcription start site region 128749	1463 bp upstream
Tssr128750	transcription start site region 128750	1441 bp upstream
Tssr128751	transcription start site region 128751	1435 bp upstream
Tssr128752	transcription start site region 128752	1376 bp upstream
Tssr128753	transcription start site region 128753	1177 bp upstream
Tssr128754	transcription start site region 128754	1107 bp upstream
Tssr128755	transcription start site region 128755	1178 bp downstream
Tssr128756	transcription start site region 128756	1195 bp downstream