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rs51698353 SNP Detail
Summary
  • ID
    rs51698353
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr3:84564198 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                        T ACAGCCCTGG CTGTCCTGGA ACTCACTTTG TAGACCAGGC
    TGGCCTCAAA CTCAGAAATC CGCCTGTCTC TGCCTCCCAA GTGCTGGGAT TAAAGGCGTG
    S
    GCCACCACCA CTCGGCTGGA TTCTAGCCTT AGAGTCAGTG TAATGTTCTG GGGCTCGTGG
    TGGCCCGGAA ATACAAGATC ACAGGTACTC AGTAGGACAA G                    
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss135427391 ENSMUSSNP5768306 ENSEMBL ENSEMBL_Sanger f SNP C G G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs51698353 SNP C G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:84564198 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm37240 predicted gene, 37240 within coordinates
Rr68541 regulatory region 68541 798 bp distal
Rr68542 regulatory region 68542 1203 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory