rs51704868 SNP Detail

Summary

• ID
  rs51704868
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:117496611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGACCAG CAAACGGGCT
  ATTTTGAGAG CACCGTCAGT CTTCTAGACC TGGGGAAAAG TCCTCCCAGC GGTCTGTGGA
  AGTCAGTGGG GGCCCTCTGA CATCCTCAGA CACAAAGGAT CCGTGCCAGG CCACAGCTGC
  TTCCGGTCCT GCTCCTGGGT CCAGACCGAG CGAGGCATTC TCTCCCTCCG GCCAGCATTT
  S
  CTCTGCAGAG AGACTGCTCC CAACAAACTG CAAAAGGAGT CGCCTGCACC CAGTTCTCTA
  TGCGCTCCGC ATCGTTGTAC CCGGTACATT ATTGTTATAA AAGAATAACA CAAGGCCAAC
  ATTCACTTAC TATAAAGGTT TCTCGCCACT GATTTCCTGT TAGCCTTTCT CCTTCTCAAC
  TTGCTGACTC CTTCGGATAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss61234273	NES16850630	PERLEGEN	MM_PANEL2	f	SNP	C	C	G	C	C	C	C	C	C	C		G	C	C		C
ss323214892	CHEV_9_117576661	CHEVERUD	SCREENING_POP	f	SNP											G				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs51704868					SNP	C	C	G	C	C	C	C	C	C	C	G	G	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61234273	NES16850630	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:117496611 () rs orientation: forward

Symbol	Name	Function Class
Rbms3	RNA binding motif, single stranded interacting protein	within coordinates
Rr193213	regulatory region 193213	590 bp proximal