rs51711224 SNP Detail

Summary

• ID
  rs51711224
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:52261141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTGCCTT CCTCTGTAGA
  TCTTGGTCAT AGAACCAACC CCTGCACCCC CGTGGAGGTA CAGGTGCCGT GCTGTGGAAG
  CAGCTCATGT GTAGAACCAG TTCTCATATG GGGCAAGCTC TTTATGTTTG GCCAGCTTGA
  CTGTTTCCAC CCATTCGGGG ACTTTCAGCT TCCCGGACTT TTTGAGGAAG GCTGCCAGAG
  S
  TCTGACGAAC TCCTGCTGGT TAATGTCTTT TACAGTAGCT CCAGGCATCC TGCGGCGCTG
  CCAGCCAGGG GAAAGGAGTG ACCATTGTTC TTATGGCTGA TAATGATCCT AATTTTCAGC
  ATGAAAGAAC CCAACTTCAT TTCTATCACA GCCTTTACAA CTTCAAGTAA TGCCATGTCA
  TACCTTGGAT GTCTCAGGTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61275255	NES16771735	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51711224					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61275255	NES16771735	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:52261141 () rs orientation: forward

Symbol	Name	Function Class
Gm67152	predicted gene, 67152	within coordinates
Rps19-ps10	ribosomal protein S19, pseudogene 10	within coordinates
Rr431354	regulatory region 431354	1693 bp distal
Rr431355	regulatory region 431355	140 bp proximal
Rr431356	regulatory region 431356	410 bp proximal