rs51712388 SNP Detail

Summary

• ID
  rs51712388
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:76286867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCTCTCTC TTACAGCATT
  TGATATGGTT CCTTTTCTGC CGTCCATCCT GAGCACCATG CTGCCTATGC TGAGCATGGC
  CAAGCAGGAC GCGCTGAAGG TGGTGTTCTG CGGCGGTAAG ACTGTGGGCA CTGCCCAGCT
  CCTTCTCGTT CTGCACTAGG GCCCCACTTG GGAGACTGTG TACAAACGTG TCCTTTGTGG
  Y
  GGGTGCCATT GAGGTGGATG TGGGCTGTCT ACAAGTAAGG TAGGGCTCAG TTGGCCGAGC
  CACTGGTGAG GAGAGACCTG TGCTCATAAA TACAGCTCCT GCCCCTTACT GCCTCCCTCG
  GATGTACTGG GGACTTGACC CTCTAACCCC TGCAGGGCTT TTGCAGAGGT CTCAATAGTC
  CTGGGGAGTG GAAAGAATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63564623	NES17025208	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51712388					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63564623	NES17025208	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:76286867 () rs orientation: forward

Symbol	Name	Function Class
Mroh1	maestro heat-like repeat family member 1	within coordinates
Rr307816	regulatory region 307816	1267 bp distal
Rr307817	regulatory region 307817	867 bp distal
Rr307818	regulatory region 307818	67 bp distal