rs51714245 SNP Detail

Summary

• ID
  rs51714245
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:10218903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGTTTGGT TGAGAACGTT
  TTCTTCATCT AGTTTCATCA AGGATATTGG CTCCTTTGTA TTTCTGTACC TGTCTGACTT
  GAGACCAGTG CAATGCTAAC GCCACAGAAC AAGTGTGAAT ATCATAAGAA CTCATGTTGT
  CTAGATTCTA AGGATTATGT CTGAGAGTCA GGATTCTCGA TCCAGAGACA ATGGCCCCAA
  Y
  GGGATGGAGC ATTGAGAGTA AGATGTCATT GAGCGTAACT GGAATGAGAT TGTGGATAGC
  TTCCATGACA TGAATTTCTC AGAATCCCTC CTCCATGGTA TTTGTGCCTA TGGTCTTGAG
  AAGCCCTCTC CCATCCAGCA GCAAGCTATT CTTCCTTTTA TCAAGGGTTA TGATTGCTCA
  AGCCCAGTCT GGGACTGGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52144225	NES15239587	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51714245					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52144225	NES15239587	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:10218903 () rs orientation: forward

Symbol	Name	Function Class
Adgb	androglobin	within coordinates
Gm15568	predicted gene 15568	within coordinates
Rr221322	regulatory region 221322	899 bp proximal
Tssr92346	transcription start site region 92346	58 bp downstream
Tssr96688	transcription start site region 96688	1574 bp downstream