rs51715443 SNP Detail

Summary

• ID
  rs51715443
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:21817502 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCATGTTGG GGCAGACCTT
  TAATCCCAGT ACTCGGAAGG AGGGGGCAGG CACTTTGAGT TCAAGGCCAA CCTGGTCTAC
  ACAGTGGAAC CTTGTCTCAA AAAAGTAAAG AAATGAAATT TCAGGAGGGT GTGGTGGCAC
  ACGTTTTTAA TCCCAGCACC CAGGAGGCAG AGGCAGGTAG ATCTTTGAGC TCAAGGCCAG
  M
  CTGGTCTACA AATTGAGTCC AGGAGAGTCG GGGCTCTGTT ATACAGAGAA ACTTTATCTT
  AAAAAACCAA AAGATAAACA AAATAAAATT ACATGTCAGA AAGGTCTATA TGTAAGATAT
  AATGTCAAAT ATTCATCCTA AGAAAATATT AAGTATTGCT GCTTAAAAAG AAGAGAGAAA
  ATCAGGAGTC TTCTAAGAAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148010640	ENSMUSSNP7136271	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51715443					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:21817502 () rs orientation: forward

Symbol	Name	Function Class
Fbxl13	F-box and leucine-rich repeat protein 13	within coordinates
Gm8539	predicted gene 8539	1490 bp downstream
Rr607927	regulatory region 607927	1910 bp proximal