rs51715897 SNP Detail

Summary

• ID
  rs51715897
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129447334 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAT AGTATCATGT GAGGCTTTTT
  W
  AAAAAAAGGT TTGATTTTAA ATTAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147587950	ENSMUSSNP1883431	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
ss320505125	CHEV_2_129431150	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51715897					SNP	A	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129447334 () rs orientation: forward

Symbol	Name	Function Class
Sirpa	signal-regulatory protein alpha	within coordinates
Tssr20146	transcription start site region 20146	1670 bp downstream