rs51720136 SNP Detail

Summary

• ID
  rs51720136
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:84564792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTGTCGCC ACCATGGCTC
  GATGTCCCGT GGGGCTCTAA TGGAAATGAT CACACTGCTG GACTGTTCTT AGTTTCAGCT
  AAGCCCTGCA CCTGTTGCTT CACCTGCTGC CAGGAAAGGG CTCACCTCCC AGCTCTCTGT
  TTGTTTATTT CCTTCCTCCG GGTTTCTGAA CTGTAAGCTT CCCTGACAAG CCCCGCCTAT
  K
  GCCCAAGGCT ACACTGCTTC CTCCTTTCTT TCTCCCTTTT ATTTTGGTGT GGGGGTGGAG
  CCCAGGGATG TGTCACTGAG TATTATCCTA CAGCCCCCTG GTAGCCCTGC TTCACCTCGG
  TGACACTCAG CTGTTTGTCT GCTCTGCTCA CTGTCTTCCA TTCATAGCCA GCCACAGCTA
  CTGCGTTCTT CTCATTTCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135427400	ENSMUSSNP2474756	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51720136					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84564792 () rs orientation: forward

Symbol	Name	Function Class
Gm37240	predicted gene, 37240	within coordinates
Rr68541	regulatory region 68541	1392 bp distal
Rr68542	regulatory region 68542	609 bp proximal
Rr68543	regulatory region 68543	1409 bp proximal
Rr76452	regulatory region 76452	1500 bp proximal