rs51722261 SNP Detail

Summary

• ID
  rs51722261
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74802949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAACTGCCA GGCTGCTGGG CATTCTCCCT CCGCCCTTCC
  AGTGGCAAAA AAACGCCAAC ATGCAACCAC CAGCCACAAA CATGGAGCCT GAGCACTAGG
  S
  CTTCCACTGG GCAGAATGTC TCTCTGTGTC CTGCTAGTGC CTAAGAAATG TTTTCTTATG
  TGCTTGGCTG GTGTGAGTGA GTGAGTGTGT GTGTGTGTG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134210187	ENSMUSSNP753100	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss325896882	CHEV_X_73004682	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51722261					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74802949 () rs orientation: forward

Symbol	Name	Function Class
4933407K13Rik	RIKEN cDNA 4933407K13 gene	within coordinates
Gm61855	predicted gene, 61855	717 bp upstream
Rr4698	regulatory region 4698	549 bp distal
Rr4699	regulatory region 4699	within coordinates
Rr8776	regulatory region 8776	1148 bp distal
Rr8777	regulatory region 8777	148 bp distal