rs51723563 SNP Detail

Summary

• ID
  rs51723563
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:76790229 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGAAATG TAAATAAATA
  AACTATCCAG TAAAAATTCA TTAACATATA TATAATTTTA ATGTTGTCTT TTCTTGACTC
  AATATGATAT CACAAGTGAT TGTTTGTTAG AATGACTTCA AGTATTGAAA AATCCTTTCT
  TTAACTTATT TAATATATCC ATATGTATCC TTTGCTATTG TTTGTGAATA TTTTTAGATG
  Y
  ATATCCACAC CTCTAAGAAA GTAGCGTTAT TATTCTAGAA TATTATACTG AATATACATA
  AGATTCTGAA GAAACCTTGT AAACAAATTT AAGGAAGACA GTACATACCC AAATGCTTAT
  CTATACCATA TAAAACATTA ATATACATGT GTATTTATTG ATATTTAATT AAACATTTGT
  CAATATATTT CATTGAATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss60755698	NES16392114	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	C	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51723563					SNP	C	T	T	C	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60755698	NES16392114	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:76790229 () rs orientation: forward

Symbol	Name	Function Class
Gm70762	predicted gene, 70762	1004 bp upstream