rs51725198 SNP Detail

Summary

• ID
  rs51725198
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:102606080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACACTCACC TCTCAGTAAG
  TCACATCCTA GTTTCCTGAA GCCATTTTAG AACACAAGGG ATAAGGCAGG CATTAAGAGT
  GTTCTAGCAT TAGAACCAAC TCGAAGCCAG AAGACTGGGG CAGTATGGAA ACTGAGCCAA
  CAGGCATAAT TGAACATACT TAGAAGTGAG GGGGGGAAGA CATCTTCATC GACCAAACAC
  K
  TTGTGCCATA GGAAGGAAAA CAAGTTCTAT CTTCTGTGCA AACTCCATCA GGTTAACAGT
  AGCTGCCTGG AGAACGTGTT CTCTTTGAAT TCAATCACAG ACCATTTGAG AGACTTTATA
  TTCCACATGC ATATAAAGTA GGAAGGGGAA ACACACACTA CATACTTCCT AGCTATGGCT
  GTGTTATGTA GTTCACTTAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61961443	NES17118812	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	T	G	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51725198					SNP	G	G	G	G	G	G	G	G	G	T	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61961443	NES17118812	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:102606080 () rs orientation: forward

Symbol	Name	Function Class
Gm41045	predicted gene, 41045	within coordinates