rs51726345 SNP Detail

Summary

• ID
  rs51726345
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66998797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCAGACTT GAAGACAAGG
  AGGATTGGTC CTGAAGTTTT CTCTTCCTTT AGTGAGGCCG TGTCCTCTGC CAACACTCAT
  ATAATGGGGT TTTCCCCAAA GTAAGGAGGG AATTGATCCA GTTACTGGAT AGTAAGATAC
  AATGAGTAGT TCCTGTAAAG GGGAATTTTT AAAAAGCATG ATATGAATCT CTCTCTAAAG
  Y
  AATTTAGCTC AAGTACACAT AACAACCAAA AGAATTGCCA GGCTGGAATG TTGATTCTGT
  TGTTAAGAGC ACTTGCTGTA ACTGAGAGGC TCTACCCAGC AGCTGACAGA AACAGATGCA
  GATACCCACA GCCAAACATT AGACAGCGCT CAGGGACTCT TATGGAAGAG TTGGAGGAAG
  GATCGTAGAC TTGAAGGGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss62440238	NES17246802	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs51726345					SNP	C	C	C	C	C	C	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62440238	NES17246802	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66998797 () rs orientation: forward

Symbol	Name	Function Class
Adra1a	adrenergic receptor, alpha 1a	within coordinates
Rr290067	regulatory region 290067	604 bp proximal
Rr296052	regulatory region 296052	610 bp proximal
Rr389792	regulatory region 389792	1307 bp upstream