rs51729750 SNP Detail

Summary

• ID
  rs51729750
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26065951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTACATACT GCTCCTAGAC
  TTAGGGATGA ACCCGTCATA GGTAGGGCGT GGAAAACCCC GGGAAACACT GACAGAACCT
  AGAGTATATA CTGTGACCTG GTGTCTCCAG CAGGCTACAG ACTGAAAGAG AAAGCACGAG
  CCACTTGGAT ATCCCCACTG CTCAGAGCTC AAGTGGCTTT GTGGCTCTTT ATTCAGACTG
  Y
  TGAATGTCTT GATGGAGAAA ATATGTGTAC CTCGTGGGCA CCACTGAGAA TCAGGATTTT
  TGGAGGCAGG TGGCACAGAT GCCATGAACC AGTAAAGTTC CGTGTAAACT GATGCATAAT
  AGCTCTTGGA GAAAATCCAA GGCTAGGGTT GCTCAGGAGT CCTGGGTCCC ATTGCCATCC
  TGGGCTCACG AGGTTCATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60255634	NES15702681	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51729750					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60255634	NES15702681	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26065951 () rs orientation: forward

Symbol	Name	Function Class
Rr523682	regulatory region 523682	1734 bp distal
Wdr90	WD repeat domain 90	within coordinates